Statistical Analysis of Bulk RNA-seq Data + Quick Intro to R and RStudio

CSTAT Seminar series: Statistical Analysis of RNA-seq Data  Part 1

Dr. Arash Yunesi, Michigan State University, CSTAT

Bulk RNA-seq, historically called RNA-seq, is one of the earliest technologies in this group. It is still widely used due to its affordability, the large number of datasets available publicly, and biological reasons. In this workshop, we will analyze a dataset from bulk RNA-seq and go through the main analyses and visualizations together. Our hands-on analyses will include quality control, pre-processing, variance stabilizing transformations, multiple testing, differentially expressed gene (DEG) analysis, gene set enrichment analysis (GSEA), deconvolution, and visualizations. We will start this workshop with a quick intro to R and RStudio before the analyses, and finish with troubleshooting and answering questions. Bring your own laptop.

This Workshop will have a non-refundable $10 registration fee to reserve your spot, paid through Eventbrite at registration. 

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